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Drinking Water Microbiome OTU Abundance Data SetSource

An abundance matrix (BM_OTU.xlsx) contains rows as OTU, columns as samples, and entries representing the abundance of each OTU as a ratio of all sequences obtained for each individual sample. This dataset is associated with the following publication: Gomez-Alvarez, V., and R. Revetta. Monitoring of Nitrification in Chloraminated Drinking Water Distribution Systems With Microbiome Bioindicators Using Supervised Machine Learning. Frontiers in Microbiology. Frontiers, Lausanne, SWITZERLAND, 11: 2254-2267, (2020).

0
No licence known
Tags:
16s rrnadrinking watermachine learningmicrobiomenitrificationoturelative abundance
Formats:
XLSX
United State Environmental Protection Agencyabout 1 year ago
Drinking Water Microbiome Sequence Data SetSource

The fasta file (BM_OTU.fasta) contain the sequences of the bacterial 16S rRNA-encoding V4 region gene (≈250 nt) for each Operational Taxonomic Unit (OTU). This dataset is associated with the following publication: Gomez-Alvarez, V., and R. Revetta. Monitoring of Nitrification in Chloraminated Drinking Water Distribution Systems With Microbiome Bioindicators Using Supervised Machine Learning. Frontiers in Microbiology. Frontiers, Lausanne, SWITZERLAND, 11: 2254-2267, (2020).

0
No licence known
Tags:
16s rrnadrinking watermachine learningmicrobial communitiesmicrobiomenitrificationotu
Formats:
APIZIP
United State Environmental Protection Agencyabout 1 year ago