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Data from: A scalable, low-cost phenotyping strategy to assess tuber size, shape, and the colorimetric features of tuber skin and flesh in potato breeding populations

This data set contains images of potato tubers from clones in the A08241 F1 breeding population grown in Aberdeen, Idaho during the 2019 field season. Each clone was grown as 8-hill plots and replicated twice. Five tubers per sample were imaged. Each face of the tuber was imaged on two different backgrounds. The five tubers were also halved lengthwise and one of side was imaged using a flatbed scanner. Resources in this dataset: Resource Title: A08241_scanner_images File Name: tubers.zip Resource description: These are images of halved potato tubers collected from clones in the A08241 breeding population using a Hewlett Packard HP ColorJet 6200C flatbed scanner. No color correction was performed on these images. Resource Title: A08241_lightbox_images File Name: box.zip Resource description: These are images of potato tubers from the A08241 breeding population captured on a lightbox background using a Nikon D7100 camera. No color correction was performed on these images. Resource Title: A08241_black_background_images File Name: std.zip Resource description: These are images of potato tubers from the A08241 breeding population captured on a black background using a Nikon D7100 camera. No color correction was performed on these images. Resource Title: A08241_lightbox_color_corrected_images File Name: lightbox_color_corrected.zip Resource description: These are images of potato tubers from the A08241 breeding population captured on a lightbox background using a Nikon D7100 camera. Color correction was performed in MATLAB by Nathan Miller. Resource Title: A08241_black_background_color_corrected_images File Name: blackbackground_color_corrected.zip Resource description: These are images of potato tubers from the A08241 breeding population captured on a non-reflective black background using a Nikon D7100 camera. Color correction was performed in MATLAB by Nathan Miller.

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np301potato
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United States Department of Agriculture10 months ago
Germplasm Resources Information Network (GRIN)

The Germplasm Resources Information Network (GRIN) is an online portal for information about agricultural genetic resources that are managed by the Agricultural Research Service of USDA, along with U.S. partnering organizations. The content includes general information about ARS animal, microbial and plant germplasm collections, most notably the U.S. National Plant Germplasm System (NPGS). The NPGS curates more than 600,000 active accessions of living plant material at 20 genebank locations around the U.S., and makes small quantities available globally to plant breeders and other professional scientists. GRIN also documents activities of Crop Germplasm Committees (CGC) that support the NPGS. The CGCs are comprised of public and private sector subject matter experts for a given crop (there are currently 44 CGCs) who voluntarily provide input on technical and operational matters to the NPGS. The site includes two searchable datasets: the ARS Rhizobium collection and Plant Variety Protection Certificates. The Rhizobium collection is living bacteria that nodulate the roots of leguminous plants symbiotically to provide nitrogen fixation. Samples are available to research scientists globally upon request. The Plant Variety Protection (PVP) Certificates are issued by the Agricultural Marketing Service (AMS) of USDA to provide intellectual property protection to registered new varieties of plants that are propagated by seed or tubers. The GRIN site allows queries of PVPs by certificate number, name of the crop, variety name, or certificate holder, all using data provided by the AMS.

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Food SecurityLivestockMaizeNational ArboretumRiceTomatoangiospermsanimalsarid land plantbiofluidscell culturescottongeneticsgermplasmgrainsgymnospermslegumesnp301organismsornamental plantpeaplantspotatopteridophytesseedssoybeanspeciestissue culturesu.s. forest service
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United States Department of Agriculture10 months ago
Germplasm Resources Information Network (GRIN)

The Germplasm Resources Information Network (GRIN) is an online portal for information about agricultural genetic resources that are managed by the Agricultural Research Service of USDA, along with U.S. partnering organizations. The content includes general information about ARS animal, microbial and plant germplasm collections, most notably the U.S. National Plant Germplasm System (NPGS). The NPGS curates more than 600,000 active accessions of living plant material at 20 genebank locations around the U.S., and makes small quantities available globally to plant breeders and other professional scientists. GRIN also documents activities of Crop Germplasm Committees (CGC) that support the NPGS. The CGCs are comprised of public and private sector subject matter experts for a given crop (there are currently 44 CGCs) who voluntarily provide input on technical and operational matters to the NPGS. The site includes two searchable datasets: the ARS Rhizobium collection and Plant Variety Protection Certificates. The Rhizobium collection is living bacteria that nodulate the roots of leguminous plants symbiotically to provide nitrogen fixation. Samples are available to research scientists globally upon request. The Plant Variety Protection (PVP) Certificates are issued by the Agricultural Marketing Service (AMS) of USDA to provide intellectual property protection to registered new varieties of plants that are propagated by seed or tubers. The GRIN site allows queries of PVPs by certificate number, name of the crop, variety name, or certificate holder, all using data provided by the AMS.

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No licence known
Tags:
Food SecurityLivestockMaizeNational ArboretumRiceTomatoU.S. Forest Serviceangiospermsanimalsarid land plantbiofluidscell culturescottongeneticsgermplasmgrainsgymnospermslegumesnp301organismsornamental plantpeaplantspotatopteridophytesseedssoybeanspeciestissue cultures
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United States Department of Agriculture10 months ago
The GRIN-Global Project

GRIN-Global is an ongoing international collaborative project to develop shared and open-source applications that help manage plant germplasm collections. The software was jointly developed by the Agricultural Research Service of USDA, Global Crop Diversity Trust, and Bioversity International, with the first version released in December 2011. The ARS has used GRIN-Global to manage its plant germplasm collections, the U.S. National Plant Germplasm System, since November 2015. GRIN-Global is an extension of Germplasm Resources Information Network (GRIN) information management system, which was first developed by ARS beginning in the mid-1980s. GRIN-Global is comprised of a suite of computer applications that are used internally by genebank staff to curate collections, as well as a public website through which scientists can query the database and request samples of germplasm through a shopping cart process.

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No licence known
Tags:
Food SecurityLivestockMaizeNational ArboretumRiceTomatoU.S. Forest Serviceangiospermsanimalsarid land plantbiofluidscell culturescottongeneticsgermplasmgrainsgymnospermslegumesnp301organismsornamental plantpeaplantspotatopteridophytesseedssoybeanspeciestissue cultures
Formats:
HTML
United States Department of Agriculture10 months ago