BEAST log data from: Characterizing a century of genetic diversity and contemporary antigenic diversity of N1 neuraminidase in IAV from North American swine

OwnerUnited States Department of Agriculture - view all

Update frequencyunknown

Last updated10 months ago

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Overview

These are the '.log' files from 'Characterizing a century of genetic diversity and contemporary antigenic diversity of N1 neuraminidase in Influenza A virus (IAV) from North American swine' generated in BEAST and used to plot molecular substitution rates and calculate statistical distances between posterior distributions of these rates. The names of these files communicate information about the various BEAST runs using the following format: cladeOrLineageName_replicate_substitutionModel_treePrior_MCMCiterations_dateOfRunWithin2021.log where replicate is not always included

BEAST Bayesian statistics Influenza A virus NP103 Swine evolution molecular substitution rate neuraminidase phylogenetic rate of evolution

Additional Information

KeyValue

dcat_modified2023-06-26

dcat_publisher_nameAgricultural Research Service

guid2a3151c9-d7df-4872-bd75-0516376b664a

language

harvest_object_idd3de97af-aba2-4b6a-8efb-42527c18a9f6

harvest_source_id2c0b1e04-ba48-4488-9de5-0dab41f9913f

harvest_source_titleUSDA Open Data Catalog

Files

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BEAST log file for clade N1.C.2.1
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BEAST log file for clade N1.C.2
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BEAST log file for clade N1.C.3.1
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BEAST log file for clade N1.C.3.2
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BEAST log file for clade N1.C.3
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BEAST log file for clade N1.P
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BEAST log file for the classical swine N1 lineage
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