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Data from: Development of a versatile resource from 1500 diverse genomes for post-genomics research
OwnerUnited States Department of Agriculture - view all
Update frequencyunknown
Last updated10 months ago
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Overview

This data set contains 32 million annotated SNPs having an average SNP density of 30 SNPs per kb and 12 non-synonymous SNPs per gene model. These SNPs were identified from a genetically diverse, worldwide, collection of soybean germplasm representing wild, landrace, and improved cultivars. A combination of new and publicly available re-sequencing data was used in this analysis. The accession genotypes and their annotations are described in the manuscript titled: 'Analysis and characterization of 1500 diverse genome sequences as a versatile resource for post-genomics research'.

GRINSNPsgenetic diversitygenomicslinkage disequilibriumnp301soybeanwhole genome resequencing
Additional Information
KeyValue
dcat_modified2023-08-01
dcat_publisher_nameAgricultural Research Service
guiddcf591c7-bff4-45c5-ac9f-70bc11f9db30
language
harvest_object_id6e78a1f5-908d-4ab6-824c-f61326c95d23
harvest_source_id2c0b1e04-ba48-4488-9de5-0dab41f9913f
harvest_source_titleUSDA Open Data Catalog
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