OwnerUnited States Department of Agriculture - view all
Update frequencyunknown
Last updated10 months ago
OverviewArachisArachis hypogaeaArachis_Axiom2 SNP arrayNP303SNPSmut Resistancenp301peanutpeanut smut
This collection contains supplementary information for the manuscript “Genetic mapping and QTL analysis for peanut smut resistance”, which reports the genetic map and quantitative trait loci associated with resistance to peanut smut, a disease caused by the fungus Thecaphora frezii. The information includes genotyping data of a 103 recombinant inbred line (RIL) population {susceptible Arachis hypogaea subsp.hypogaea × resistant synthetic amphidiploid [(A. correntina × A. cardenasii) × A. batizocoi]⁴ˣ} and parental lines, generated with the Axiom_Arachis2 SNP array. For more information about this dataset contact: Renee Arias: Renee.Arias@usda.gov or Alicia Massa: Alicia.Massa@usda.gov
Additional Information
KeyValue
dcat_modified2023-09-19
dcat_publisher_nameAgricultural Research Service
guid65c23e95-2fcb-44c2-b7e7-439755669ba5
language
harvest_object_id9afb802b-9b5c-48fb-9462-22c627c98761
harvest_source_id2c0b1e04-ba48-4488-9de5-0dab41f9913f
harvest_source_titleUSDA Open Data Catalog
Files
- vcfSupplementary Data 1: SNP genotypes as called by the Axiom Analysis Suite File name: SD01_RILs_SNPs_whole_Axiom_Arachis2.txt
- vcfSupplementary Data 2: Genotyping calls in VCF format File name: SD02_RILs_SNPs_whole_Axiom_Arachis2.vcf
- JPEGRILs of the mapping population
- TXTData Dictionary
