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Hyalella azteca Official Gene Set v1.2
OwnerUnited States Department of Agriculture - view all
Update frequencyunknown
Last updated10 months ago
Format
Overview

This dataset presents the Hyalella azteca Official Gene Set OGSv1.2. The Hyalella azteca genome assembly was recently updated to assembly Hazt_2.0 (https://www.ncbi.nlm.nih.gov/assembly/GCF_000764305.1). The Hyalella azteca Official Gene Set v1.0, originally generated from assembly Hyalella azteca Genome Assembly 1.0 (10.15482/USDA.ADC/1415994) was lifted over to Hazt_2.0 using the NCBI's remap service, the CrossMap software (http://crossmap.sourceforge.net/), and remap_gff3 (https://github.com/NAL-i5K/remap-gff3). This resulted in the unreleased OGSv1.1. OGSv1.1 received additional QA/QC during NCBI submission, generating Hyalella azteca OGSv1.2. This dataset contains the following files: hyaazt_OGSv1.2.tar.gz hyaazt_OGSv1.2.1.gff - GFF3 file of the Hyalella azteca Official Gene Set OGSv1.2 hyaazt_OGSv1.2_cds.fa - CDS fasta file of the Hyalella azteca Official Gene Set OGSv1.2 hyaazt_OGSv1.2_pep.fa - Protein fasta file of the Hyalella azteca Official Gene Set OGSv1.2 hyaazt_OGSv1.2_trans.fa - Transcript fasta file of the Hyalella azteca Official Gene Set OGSv1.2 readme

Hyalella aztecaarthropodsi5k
Additional Information
KeyValue
dcat_modified2023-09-20
dcat_publisher_nameAgricultural Research Service
guida9d0c11b-3e0b-4536-9572-1467eba67d87
language
harvest_object_id735fc942-202e-4adf-a0cd-649d995e01cb
harvest_source_id2c0b1e04-ba48-4488-9de5-0dab41f9913f
harvest_source_titleUSDA Open Data Catalog
Files
  • BIN
    Hyalella azteca Official Gene Set v1.2
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